Python for Bioinformatics and Data Analysis (ILS-MA-B14)7.5 ECTS
(englische Bezeichnung: Python für Bioinformatik und Datenanalyse)
(Prüfungsordnungsmodul: Python for bioinformatics and data analysis)

Lectures:

• • Python for Bioinformatics and Data Analysis
    (Vorlesung mit Übung, Rainer Böckmann et al., Tue, 16:00 - 19:00, CIP Biologie)

Inhalt:

Python Basics: Introduction to modern scripting language Python and Jupyter Notebooks for creating code and visualizations; Data structures, conditions, branching, loops, functions, numpy, scipy, matplotlib libraries
Applications in Data Analysis: handling of data and image files, visualization of data for publication, regression & correlation analysis, hypothesis testing, image analysis
Applications in Bioinformatics: sequence alignments, RNA-Seq/Gene expression data analysis, NGS data, use of Protein Data Bank, processing of super-resolution image data

Lernziele und Kompetenzen:

The students

• understand basic concepts of Python programming and Linux shell

• acquire problem-oriented programming skills using Python

• apply basic Python libraries in data analysis and bioinformatics

• solve and implement simple application problems
  

Literatur:

• Lecture notes

• Jupyter Notebooks
  

Verwendbarkeit des Moduls / Einpassung in den Musterstudienplan:

1. Integrated Life Sciences: Biology, Biomathematics, Biophysics (Master of Science)
   (Po-Vers. 2019w | NatFak | Integrated Life Sciences: Biology, Biomathematics, Biophysics (Master of Science) | Module Groups | MG3: Biological Structures and Processes | Mandatory Elective Modules Group 3 | Python for bioinformatics and data analysis)

Studien-/Prüfungsleistungen:

Python for bioinformatics and data analysis (Prüfungsnummer: 20621)

Prüfungsleistung, mehrteilige Prüfung, benotet, 7.5 ECTS

Anteil an der Berechnung der Modulnote: 100.0 %

weitere Erläuterungen:

• project work

• presentation

Erstablegung: SS 2022

1. Prüfer:

Rainer Böckmann